Index

A

absolute_path_from_relative() (HSTB.kluster.fqpr_project.FqprProject method) absorption_description (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute) accuracy_test() (in module HSTB.kluster.modules.sat) add_action() (HSTB.kluster.fqpr_actions.FqprActionContainer method) add_dict() (HSTB.kluster.fqpr_intelligence.IntelModule method) add_file() (HSTB.kluster.fqpr_intelligence.FqprIntel method) add_file_handler() (in module HSTB.kluster.logging_conf)

add_fqpr() (HSTB.kluster.fqpr_project.FqprProject method) add_surface() (HSTB.kluster.fqpr_project.FqprProject method) add_to_buffer() (HSTB.kluster.monitor.DirectoryMonitor method) add_vessel_file() (HSTB.kluster.fqpr_project.FqprProject method) adjust_for_z() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) Allscatter (class in HSTB.kluster.modules.backscatter) apply_grid_to_soundings() (in module HSTB.kluster.modules.georeference) area_correction (HSTB.kluster.modules.backscatter.BScatter attribute) attenuation (HSTB.kluster.modules.backscatter.BScatter attribute) avg_correct() (in module HSTB.kluster.modules.backscatter)

B

backward() (HSTB.kluster.modules.visualizations.Player method) BaseTest (class in HSTB.kluster.modules.sat) batch_read() (HSTB.kluster.xarray_conversion.BatchRead method) batch_read_configure_options() (in module HSTB.kluster.xarray_conversion) BatchRead (class in HSTB.kluster.xarray_conversion) bin1d() (in module HSTB.kluster.numba_helpers) bin2d() (in module HSTB.kluster.numba_helpers) bind_to() (HSTB.kluster.modules.visualizations.Player method) (HSTB.kluster.monitor.DirectoryMonitor method) bind_to_action_update() (HSTB.kluster.fqpr_intelligence.FqprIntel method) BScatter (class in HSTB.kluster.modules.backscatter) build_additional_line_metadata() (HSTB.kluster.xarray_conversion.BatchRead method) build_beam_pointing_vectors() (in module HSTB.kluster.modules.beampointingvector) build_crs() (in module HSTB.kluster.fqpr_helpers)

build_entwine_points() (in module HSTB.kluster.pdal_entwine) build_geographic_beam_vectors() (in module HSTB.kluster.modules.beampointingvector) build_highpass_filter_coeff() (in module HSTB.kluster.modules.wobble) build_initial_file_state() (HSTB.kluster.monitor.DirectoryMonitor method) build_mounting_angle_mat() (in module HSTB.kluster.rotations) build_multibeam_action() (in module HSTB.kluster.fqpr_actions) build_nav_action() (in module HSTB.kluster.fqpr_actions) build_offsets() (HSTB.kluster.xarray_conversion.BatchRead method) build_orientation_vectors() (in module HSTB.kluster.modules.orientation) build_processing_action() (in module HSTB.kluster.fqpr_actions) build_rot_mat() (in module HSTB.kluster.rotations) build_surface_action() (in module HSTB.kluster.fqpr_actions) build_svp_action() (in module HSTB.kluster.fqpr_actions) build_visualizations() (HSTB.kluster.fqpr_project.FqprProject method) build_xyzrph() (in module HSTB.kluster.xarray_conversion)

C

calc_max_var() (HSTB.kluster.fqpr_generation.Fqpr method) calc_min_var() (HSTB.kluster.fqpr_generation.Fqpr method) calc_order() (in module HSTB.kluster.modules.sat) calculate_total_uncertainty() (HSTB.kluster.fqpr_generation.Fqpr method) calculate_tpu() (in module HSTB.kluster.modules.tpu) calculate_uncertainty_ifremer() (in module HSTB.kluster.modules.tpu) calculate_uncertainty_kongsberg() (in module HSTB.kluster.modules.tpu) calendar_day_time_to_utctimestamp() (in module HSTB.kluster.utc_helpers) carry_over_optional() (in module HSTB.kluster.fqpr_vessel) cast_data_from_file() (in module HSTB.kluster.modules.svcorrect) chunk_size (HSTB.kluster.xarray_conversion.BatchRead attribute) clear() (HSTB.kluster.fqpr_actions.FqprActionContainer method) (HSTB.kluster.fqpr_intelligence.FqprIntel method) (HSTB.kluster.fqpr_intelligence.IntelModule method) clear_actions_by_type() (HSTB.kluster.fqpr_actions.FqprActionContainer method) clear_data_vars_from_dataset() (in module HSTB.kluster.xarray_helpers) clear_observers() (HSTB.kluster.modules.visualizations.Player method) clear_vdatum_path() (in module HSTB.kluster.modules.georeference) client_needs_restart() (in module HSTB.kluster.dask_helpers) close() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.fqpr_project.FqprProject method) (HSTB.kluster.gdal_helpers.VectorLayer method)

close_event() (HSTB.kluster.modules.visualizations.Player method) combine_arrays_to_dataset() (in module HSTB.kluster.xarray_helpers) combine_rotation_matrix() (in module HSTB.kluster.rotations) combine_xr_attributes() (in module HSTB.kluster.xarray_helpers) compare_and_find_gaps() (in module HSTB.kluster.xarray_helpers) compare_dict_data() (in module HSTB.kluster.fqpr_vessel) compute_geo_beam_pointing_angle() (in module HSTB.kluster.modules.beampointingvector) compute_geohash() (in module HSTB.kluster.modules.georeference) compute_relative_azimuth() (in module HSTB.kluster.modules.beampointingvector) construct_array_relative_beamvector() (in module HSTB.kluster.modules.beampointingvector) construct_crs() (HSTB.kluster.fqpr_generation.Fqpr method) convert_from_fqpr_xyzrph() (in module HSTB.kluster.fqpr_vessel) convert_from_vessel_xyzrph() (in module HSTB.kluster.fqpr_vessel) convert_multibeam() (in module HSTB.kluster.fqpr_convenience) copy() (HSTB.kluster.fqpr_generation.Fqpr method) correct_for_counter_reset() (HSTB.kluster.xarray_conversion.BatchRead method) create_new_project() (in module HSTB.kluster.fqpr_project) create_new_vessel_file() (in module HSTB.kluster.fqpr_vessel) cross() (in module HSTB.kluster.modules.beampointingvector) crs_to_osgeo() (in module HSTB.kluster.gdal_helpers)

D

dask_close_localcluster() (in module HSTB.kluster.dask_helpers) dask_find_or_start_client() (in module HSTB.kluster.dask_helpers) DaskProcessSynchronizer (class in HSTB.kluster.dask_helpers) DateTimeToUTCs80() (in module HSTB.kluster.utc_helpers) decode_geohash() (in module HSTB.kluster.modules.georeference) delete_layer() (HSTB.kluster.gdal_helpers.VectorLayer method) determine_altitude_corr() (HSTB.kluster.fqpr_generation.Fqpr method) determine_good_chunksize() (in module HSTB.kluster.xarray_conversion) determine_induced_heave() (HSTB.kluster.fqpr_generation.Fqpr method) determine_optimal_chunks() (in module HSTB.kluster.dask_helpers)

difference_grid_and_soundings() (in module HSTB.kluster.modules.sat) DirectoryMonitor (class in HSTB.kluster.monitor) distance_between_coordinates() (in module HSTB.kluster.modules.georeference) distrib_run_build_beam_pointing_vector() (in module HSTB.kluster.modules.beampointingvector) distrib_run_build_orientation_vectors() (in module HSTB.kluster.modules.orientation) distrib_run_calculate_tpu() (in module HSTB.kluster.modules.tpu) distrib_run_georeference() (in module HSTB.kluster.modules.georeference) distrib_run_process_backscatter() (in module HSTB.kluster.modules.backscatter) distributed_run_sv_correct() (in module HSTB.kluster.modules.svcorrect) divide_arrays_by_time_index() (in module HSTB.kluster.xarray_helpers)

E

epsg_determinator() (in module HSTB.kluster.fqpr_helpers) execute() (HSTB.kluster.fqpr_actions.FqprAction method) execute_action() (HSTB.kluster.fqpr_actions.FqprActionContainer method) (HSTB.kluster.fqpr_intelligence.FqprIntel method) export_dataset() (HSTB.kluster.fqpr_generation.Fqpr method) export_dataset_to_csv() (HSTB.kluster.modules.export.FqprExport method) export_lines_to_file() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.export.FqprExport method)

export_pings_to_file() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.export.FqprExport method) export_soundings_to_file() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.export.FqprExport method) export_tracklines_to_file() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.export.FqprExport method) export_variable() (HSTB.kluster.fqpr_generation.Fqpr method) export_variable_to_csv() (HSTB.kluster.modules.export.FqprExport method) ExtinctionTest (class in HSTB.kluster.modules.sat)

F

file_path_sorted_by_time() (HSTB.kluster.fqpr_intelligence.MultibeamModule method) filter() (HSTB.kluster.logging_conf.StdErrFilter method) (HSTB.kluster.logging_conf.StdOutFilter method) filter_subset_by_detection() (in module HSTB.kluster.modules.subset) filter_subset_by_polygon() (in module HSTB.kluster.modules.subset) fit_sin() (in module HSTB.kluster.modules.wobble) fix_indices() (HSTB.kluster.fqpr_generation.Fqpr method) fix_xarray_dataset_index() (in module HSTB.kluster.xarray_helpers) fixed_gain (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute)

forward() (HSTB.kluster.modules.visualizations.Player method) Fqpr (class in HSTB.kluster.fqpr_generation) FqprAction (class in HSTB.kluster.fqpr_actions) FqprActionContainer (class in HSTB.kluster.fqpr_actions) FqprExport (class in HSTB.kluster.modules.export) FqprIntel (class in HSTB.kluster.fqpr_intelligence) FqprProject (class in HSTB.kluster.fqpr_project) FqprSubset (class in HSTB.kluster.modules.subset) FqprVisualizations (class in HSTB.kluster.modules.visualizations)

G

gain_selection_description (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute) gather_basic_file_info() (in module HSTB.kluster.fqpr_intelligence) gather_dataset_attributes() (in module HSTB.kluster.xarray_conversion) gather_exportlogfile_info() (in module HSTB.kluster.fqpr_intelligence) gather_multibeam_info() (in module HSTB.kluster.fqpr_intelligence) gather_naverrorfile_info() (in module HSTB.kluster.fqpr_intelligence) gather_navfile_info() (in module HSTB.kluster.fqpr_intelligence) gather_svp_info() (in module HSTB.kluster.fqpr_intelligence) gdal_output_file_exists() (in module HSTB.kluster.gdal_helpers) gdal_raster_create() (in module HSTB.kluster.gdal_helpers) generate_avg_corrector() (in module HSTB.kluster.modules.backscatter) generate_lookup_table() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) generate_new_mosaic() (in module HSTB.kluster.fqpr_convenience) generate_new_surface() (in module HSTB.kluster.fqpr_convenience) generate_starter_orientation_vectors() (HSTB.kluster.fqpr_generation.Fqpr method) generate_starting_data() (HSTB.kluster.modules.wobble.WobbleTest method) generate_total_uncertainties() (HSTB.kluster.modules.tpu.Tpu method) geohash_to_polygon() (in module HSTB.kluster.modules.georeference) georef_by_worker() (in module HSTB.kluster.modules.georeference) georef_xyz() (HSTB.kluster.fqpr_generation.Fqpr method) get_attributes_from_fqpr() (in module HSTB.kluster.fqpr_convenience) get_attributes_from_zarr_stores() (in module HSTB.kluster.fqpr_convenience) get_beam_pointing_vectors() (HSTB.kluster.fqpr_generation.Fqpr method)

get_beamwise_interpolation() (in module HSTB.kluster.xarray_helpers) get_cluster_params() (HSTB.kluster.fqpr_generation.Fqpr method) get_dask_client() (HSTB.kluster.fqpr_project.FqprProject method) get_file_size() (in module HSTB.kluster.monitor) get_fqpr_by_serial_number() (HSTB.kluster.fqpr_project.FqprProject method) get_fqprs_by_paths() (HSTB.kluster.fqpr_project.FqprProject method) get_layer_by_name() (HSTB.kluster.gdal_helpers.VectorLayer method) get_max_cluster_allocated_memory() (in module HSTB.kluster.dask_helpers) get_nearest_install_parameters() (HSTB.kluster.xarray_conversion.BatchRead method) get_nearest_runtime() (in module HSTB.kluster.xarray_conversion) get_nearest_runtime_parameters() (HSTB.kluster.xarray_conversion.BatchRead method) get_next_action() (HSTB.kluster.fqpr_actions.FqprActionContainer method) get_number_of_workers() (in module HSTB.kluster.dask_helpers) get_orientation_vectors() (HSTB.kluster.fqpr_generation.Fqpr method) get_overlapping_timestamps() (in module HSTB.kluster.fqpr_vessel) get_ping_times() (in module HSTB.kluster.fqpr_generation) get_raster_attribution() (in module HSTB.kluster.gdal_helpers) get_raster_bands() (in module HSTB.kluster.gdal_helpers) get_sv_files_from_directory() (in module HSTB.kluster.modules.svcorrect) get_times() (in module HSTB.kluster.modules.orientation) get_variable_by_filter() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) get_vector_attribution() (in module HSTB.kluster.gdal_helpers) get_vector_layers() (in module HSTB.kluster.gdal_helpers)

H

has_actions (HSTB.kluster.fqpr_intelligence.FqprIntel attribute) has_sbet (HSTB.kluster.fqpr_generation.Fqpr attribute) haversine() (in module HSTB.kluster.fqpr_helpers) hide_layer() (HSTB.kluster.gdal_helpers.VectorLayer method) hist2d_numba_seq() (in module HSTB.kluster.numba_helpers) HSTB.kluster.dask_helpers module HSTB.kluster.fqpr_actions module HSTB.kluster.fqpr_convenience module HSTB.kluster.fqpr_generation module HSTB.kluster.fqpr_helpers module HSTB.kluster.fqpr_intelligence module HSTB.kluster.fqpr_project module HSTB.kluster.fqpr_vessel module HSTB.kluster.gdal_helpers module HSTB.kluster.logging_conf module HSTB.kluster.modules.backscatter module HSTB.kluster.modules.beampointingvector module HSTB.kluster.modules.export module

HSTB.kluster.modules.georeference module HSTB.kluster.modules.orientation module HSTB.kluster.modules.sat module HSTB.kluster.modules.subset module HSTB.kluster.modules.svcorrect module HSTB.kluster.modules.tpu module HSTB.kluster.modules.visualizations module HSTB.kluster.modules.wobble module HSTB.kluster.monitor module HSTB.kluster.numba_helpers module HSTB.kluster.pdal_entwine module HSTB.kluster.pydro_helpers module HSTB.kluster.rotations module HSTB.kluster.utc_helpers module HSTB.kluster.xarray_conversion module HSTB.kluster.xarray_helpers module

I

import_post_processed_navigation() (HSTB.kluster.fqpr_generation.Fqpr method) import_processed_navigation() (in module HSTB.kluster.fqpr_convenience) import_sound_velocity() (in module HSTB.kluster.fqpr_convenience) import_sound_velocity_files() (HSTB.kluster.fqpr_generation.Fqpr method) initial_att_interpolation() (HSTB.kluster.fqpr_generation.Fqpr method) initialize_intermediate_data() (HSTB.kluster.fqpr_generation.Fqpr method) initialize_log() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.xarray_conversion.BatchRead method) input_datum (HSTB.kluster.fqpr_generation.Fqpr attribute) intel_process() (in module HSTB.kluster.fqpr_intelligence) intel_process_service() (in module HSTB.kluster.fqpr_intelligence) IntelligenceMonitorHandler (class in HSTB.kluster.monitor)

IntelModule (class in HSTB.kluster.fqpr_intelligence) interp_across_chunks() (in module HSTB.kluster.xarray_helpers) interp_to_ping_record() (HSTB.kluster.fqpr_generation.Fqpr method) interpolate_extended_casts() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) intersects() (HSTB.kluster.fqpr_generation.Fqpr method) is_dual_head() (HSTB.kluster.xarray_conversion.BatchRead method) is_inside_sm() (in module HSTB.kluster.numba_helpers) is_inside_sm_parallel() (in module HSTB.kluster.numba_helpers) is_processed() (HSTB.kluster.fqpr_generation.Fqpr method) is_pydro() (in module HSTB.kluster.pydro_helpers) is_subset (HSTB.kluster.modules.subset.FqprSubset attribute) is_virtual (HSTB.kluster.gdal_helpers.VectorLayer attribute)

J

julian_day_time_to_utctimestamp() (in module HSTB.kluster.utc_helpers)

K

Kmallscatter (class in HSTB.kluster.modules.backscatter)

L

last_operation_date (HSTB.kluster.fqpr_generation.Fqpr attribute) likelihood_file_name_match() (in module HSTB.kluster.fqpr_intelligence) likelihood_files_are_close() (in module HSTB.kluster.fqpr_intelligence) likelihood_start_end_times_close() (in module HSTB.kluster.fqpr_intelligence) line_attributes() (HSTB.kluster.fqpr_generation.Fqpr method) line_is_processed() (HSTB.kluster.fqpr_generation.Fqpr method) linear_regression() (in module HSTB.kluster.modules.wobble)

load_from_data() (HSTB.kluster.modules.tpu.Tpu method) load_from_profile() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) load_from_xarray() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) logfile_matches() (in module HSTB.kluster.logging_conf) logger_has_file_handler() (in module HSTB.kluster.logging_conf) logger_remove_file_handlers() (in module HSTB.kluster.logging_conf) LoggerClass (class in HSTB.kluster.logging_conf)

M

match_multibeam_files_to_project() (HSTB.kluster.fqpr_intelligence.FqprIntel method) match_navigation_files() (HSTB.kluster.fqpr_intelligence.FqprIntel method) match_navigation_files_to_project() (HSTB.kluster.fqpr_intelligence.FqprIntel method) match_svp_files_to_project() (HSTB.kluster.fqpr_intelligence.FqprIntel method) max_time (HSTB.kluster.fqpr_generation.Fqpr attribute) min_time (HSTB.kluster.fqpr_generation.Fqpr attribute) module HSTB.kluster.dask_helpers HSTB.kluster.fqpr_actions HSTB.kluster.fqpr_convenience HSTB.kluster.fqpr_generation HSTB.kluster.fqpr_helpers HSTB.kluster.fqpr_intelligence HSTB.kluster.fqpr_project HSTB.kluster.fqpr_vessel HSTB.kluster.gdal_helpers HSTB.kluster.logging_conf HSTB.kluster.modules.backscatter HSTB.kluster.modules.beampointingvector HSTB.kluster.modules.export HSTB.kluster.modules.georeference HSTB.kluster.modules.orientation HSTB.kluster.modules.sat HSTB.kluster.modules.subset HSTB.kluster.modules.svcorrect HSTB.kluster.modules.tpu HSTB.kluster.modules.visualizations HSTB.kluster.modules.wobble HSTB.kluster.monitor HSTB.kluster.numba_helpers HSTB.kluster.pdal_entwine HSTB.kluster.pydro_helpers HSTB.kluster.rotations HSTB.kluster.utc_helpers HSTB.kluster.xarray_conversion HSTB.kluster.xarray_helpers

multibeam_extension (HSTB.kluster.fqpr_generation.Fqpr attribute) MultibeamModule (class in HSTB.kluster.fqpr_intelligence) my_open_mfdataset() (in module HSTB.kluster.xarray_helpers)

N

NavErrorModule (class in HSTB.kluster.fqpr_intelligence) NavExportLogModule (class in HSTB.kluster.fqpr_intelligence) NavigationModule (class in HSTB.kluster.fqpr_intelligence) near_normal_description (HSTB.kluster.modules.backscatter.Allscatter attribute)

new_geohash() (in module HSTB.kluster.modules.georeference) new_project_from_directory() (HSTB.kluster.fqpr_project.FqprProject method) newfile (HSTB.kluster.monitor.DirectoryMonitor attribute) number_of_heads (HSTB.kluster.fqpr_generation.Fqpr attribute) number_of_pings (HSTB.kluster.fqpr_generation.Fqpr attribute)

O

ogr_output_file_exists() (in module HSTB.kluster.gdal_helpers) on_created() (HSTB.kluster.monitor.IntelligenceMonitorHandler method) on_deleted() (HSTB.kluster.monitor.IntelligenceMonitorHandler method) onebackward() (HSTB.kluster.modules.visualizations.Player method) oneforward() (HSTB.kluster.modules.visualizations.Player method) onestep() (HSTB.kluster.modules.visualizations.Player method)

only_retain_earliest_entry() (in module HSTB.kluster.fqpr_vessel) open() (HSTB.kluster.fqpr_vessel.VesselFile method) open_project() (HSTB.kluster.fqpr_project.FqprProject method) (in module HSTB.kluster.fqpr_project) overwrite_raw_navigation() (HSTB.kluster.fqpr_generation.Fqpr method) (in module HSTB.kluster.fqpr_convenience)

P

path_relative_to_project() (HSTB.kluster.fqpr_project.FqprProject method) perform_all_processing() (in module HSTB.kluster.fqpr_convenience) PingPeriodTest (class in HSTB.kluster.modules.sat) play() (HSTB.kluster.modules.visualizations.Player method) Player (class in HSTB.kluster.modules.visualizations) plot() (HSTB.kluster.modules.sat.ExtinctionTest method) (HSTB.kluster.modules.sat.PingPeriodTest method) plot_allowable_percent_deviation() (HSTB.kluster.modules.wobble.WobbleTest method) plot_attitude_latency() (HSTB.kluster.modules.wobble.WobbleTest method) plot_attitude_scaling_one() (HSTB.kluster.modules.wobble.WobbleTest method) plot_attitude_scaling_two() (HSTB.kluster.modules.wobble.WobbleTest method) plot_backscatter_components() (HSTB.kluster.modules.backscatter.BScatter method) plot_backscatter_sample() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_correlation_table() (HSTB.kluster.modules.wobble.WobbleTest method) plot_heave_sound_speed_one() (HSTB.kluster.modules.wobble.WobbleTest method) plot_heave_sound_speed_two() (HSTB.kluster.modules.wobble.WobbleTest method) plot_sound_velocity_map() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_sound_velocity_profiles() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_surface_sv_vs_profiles() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_thu_sample() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_tvu_sample() (HSTB.kluster.modules.visualizations.FqprVisualizations method) plot_x_lever_arm_error() (HSTB.kluster.modules.wobble.WobbleTest method) plot_y_lever_arm_error() (HSTB.kluster.modules.wobble.WobbleTest method) plot_yaw_alignment() (HSTB.kluster.modules.wobble.WobbleTest method)

plotv2() (HSTB.kluster.modules.sat.ExtinctionTest method) points_to_surface() (in module HSTB.kluster.fqpr_convenience) polygon_to_geohashes() (in module HSTB.kluster.modules.georeference) populate_from_dict() (HSTB.kluster.modules.tpu.Tpu method) power_selection_description (HSTB.kluster.modules.backscatter.S7kscatter attribute) print_msg() (HSTB.kluster.logging_conf.LoggerClass method) print_progress_bar() (in module HSTB.kluster.fqpr_helpers) print_summary() (HSTB.kluster.fqpr_actions.FqprAction method) process() (HSTB.kluster.modules.backscatter.BScatter method) process_backscatter() (HSTB.kluster.fqpr_generation.Fqpr method) process_multibeam() (in module HSTB.kluster.fqpr_convenience) pulse_length_description (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute) push_to_kluster_intelligence() (HSTB.kluster.monitor.DirectoryMonitor method) pyproj_crs_to_osgeo() (in module HSTB.kluster.gdal_helpers) PyTmHMSXtoS() (in module HSTB.kluster.utc_helpers) PyTmStoHMSX() (in module HSTB.kluster.utc_helpers) PyTmUTCs80toYDS() (in module HSTB.kluster.utc_helpers) PyTmYDSminusYDS() (in module HSTB.kluster.utc_helpers) PyTmYDSplusS() (in module HSTB.kluster.utc_helpers) PyTmYDStoUTCs80() (in module HSTB.kluster.utc_helpers) PyTmYJDtoMD() (in module HSTB.kluster.utc_helpers) PyTmYMDtoJD() (in module HSTB.kluster.utc_helpers)

R

raw_intensity_description (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute) read() (HSTB.kluster.xarray_conversion.BatchRead method) read_from_netcdf_fils() (HSTB.kluster.xarray_conversion.BatchRead method) read_from_source() (HSTB.kluster.fqpr_generation.Fqpr method) read_from_zarr_fils() (HSTB.kluster.xarray_conversion.BatchRead method) redo_subset() (HSTB.kluster.modules.subset.FqprSubset method) reform_nan_array() (in module HSTB.kluster.xarray_helpers) refresh_fqpr_attribution() (HSTB.kluster.fqpr_project.FqprProject method) regenerate_actions() (HSTB.kluster.fqpr_intelligence.FqprIntel method) regenerate_fqpr_lines() (HSTB.kluster.fqpr_project.FqprProject method) reload_attituderecords() (HSTB.kluster.xarray_conversion.BatchRead method) reload_data() (in module HSTB.kluster.fqpr_convenience) reload_pingrecords() (HSTB.kluster.xarray_conversion.BatchRead method) reload_surface() (in module HSTB.kluster.fqpr_convenience) reload_zarr_records() (in module HSTB.kluster.xarray_helpers) remove_action() (HSTB.kluster.fqpr_actions.FqprActionContainer method) remove_file() (HSTB.kluster.fqpr_intelligence.FqprIntel method) (HSTB.kluster.fqpr_intelligence.IntelModule method) (HSTB.kluster.fqpr_intelligence.MultibeamModule method) (HSTB.kluster.fqpr_intelligence.NavErrorModule method) (HSTB.kluster.fqpr_intelligence.NavExportLogModule method) (HSTB.kluster.fqpr_intelligence.NavigationModule method) (HSTB.kluster.fqpr_intelligence.SvpModule method) remove_fqpr() (HSTB.kluster.fqpr_project.FqprProject method) remove_post_processed_navigation() (HSTB.kluster.fqpr_generation.Fqpr method) remove_profile() (HSTB.kluster.fqpr_generation.Fqpr method) remove_surface() (HSTB.kluster.fqpr_project.FqprProject method) reprocess_fqprs() (in module HSTB.kluster.fqpr_project) reprocess_sounding_selection() (in module HSTB.kluster.fqpr_convenience) resize_zarr() (in module HSTB.kluster.xarray_helpers) restore_subset() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) retrieve_activate_batch() (in module HSTB.kluster.pydro_helpers) retrieve_data_for_time_segments() (HSTB.kluster.fqpr_project.FqprProject method) retrieve_install_prefix() (in module HSTB.kluster.pydro_helpers) retrieve_noaa_folder_path() (in module HSTB.kluster.pydro_helpers) retrieve_scripts_folder() (in module HSTB.kluster.pydro_helpers) retrieve_vdatum_folder_path() (in module HSTB.kluster.pydro_helpers) return_actions_by_type() (HSTB.kluster.fqpr_actions.FqprActionContainer method) return_additional_xyz_offsets() (HSTB.kluster.fqpr_generation.Fqpr method) return_all_profiles() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.xarray_conversion.BatchRead method) return_applicable_casts() (HSTB.kluster.fqpr_generation.Fqpr method) return_array_geographic_rotation() (in module HSTB.kluster.modules.beampointingvector) return_attitude_rotation_matrix() (in module HSTB.kluster.rotations) return_avg_tables() (in module HSTB.kluster.fqpr_convenience) return_backscatter_settings() (in module HSTB.kluster.modules.backscatter) return_cast_dict() (HSTB.kluster.fqpr_generation.Fqpr method) return_cast_idx_nearestindistance() (HSTB.kluster.fqpr_generation.Fqpr method) return_cast_idx_nearestindistance_fourhours() (HSTB.kluster.fqpr_generation.Fqpr method) return_cast_idx_nearestintime() (HSTB.kluster.fqpr_generation.Fqpr method) return_cast_idx_nearestintime_fourhours() (HSTB.kluster.fqpr_generation.Fqpr method) return_chunk_indices() (HSTB.kluster.fqpr_generation.Fqpr method) return_chunk_slices() (in module HSTB.kluster.xarray_helpers) return_chunked_fil() (in module HSTB.kluster.xarray_conversion) return_data() (HSTB.kluster.fqpr_vessel.VesselFile method) return_directory_from_data() (in module HSTB.kluster.fqpr_helpers) return_files_from_path() (in module HSTB.kluster.fqpr_helpers) return_fqpr_instances() (HSTB.kluster.fqpr_project.FqprProject method) return_fqpr_paths() (HSTB.kluster.fqpr_project.FqprProject method) return_gdal_version() (in module HSTB.kluster.gdal_helpers)

return_high_pass_filtered_depth() (in module HSTB.kluster.modules.wobble) return_high_pass_filtered_slope() (in module HSTB.kluster.modules.wobble) return_intel_modules() (HSTB.kluster.fqpr_intelligence.FqprIntel method) return_line_dict() (HSTB.kluster.fqpr_generation.Fqpr method) return_line_navigation() (HSTB.kluster.fqpr_project.FqprProject method) return_line_owner() (HSTB.kluster.fqpr_project.FqprProject method) return_line_time() (HSTB.kluster.fqpr_generation.Fqpr method) return_line_xyzrph() (HSTB.kluster.fqpr_generation.Fqpr method) return_lines_for_times() (HSTB.kluster.fqpr_generation.Fqpr method) return_lines_in_box() (HSTB.kluster.fqpr_project.FqprProject method) return_log_name() (in module HSTB.kluster.logging_conf) return_logger() (in module HSTB.kluster.logging_conf) return_mounting_rotation_matrix() (in module HSTB.kluster.rotations) return_navigation() (HSTB.kluster.fqpr_generation.Fqpr method) return_nearest_soundspeed_profile() (HSTB.kluster.xarray_conversion.BatchRead method) return_next_action() (HSTB.kluster.fqpr_generation.Fqpr method) return_next_unprocessed_line() (HSTB.kluster.fqpr_generation.Fqpr method) return_period_of_signal() (in module HSTB.kluster.modules.wobble) return_ping_counters_at_time() (HSTB.kluster.xarray_conversion.BatchRead method) return_prefix_for_rp() (HSTB.kluster.xarray_conversion.BatchRead method) return_processed_data_folders() (in module HSTB.kluster.fqpr_convenience) return_processing_dashboard() (HSTB.kluster.fqpr_generation.Fqpr method) return_project_data() (in module HSTB.kluster.fqpr_project) return_project_folder() (HSTB.kluster.fqpr_project.FqprProject method) return_project_lines() (HSTB.kluster.fqpr_project.FqprProject method) return_raw_navigation() (HSTB.kluster.xarray_conversion.BatchRead method) return_rounded_frequency() (HSTB.kluster.fqpr_generation.Fqpr method) return_runtime_and_installation_settings_dicts() (HSTB.kluster.xarray_conversion.BatchRead method) return_runtime_idx_nearestintime() (HSTB.kluster.fqpr_generation.Fqpr method) return_rx_xyzrph() (HSTB.kluster.xarray_conversion.BatchRead method) return_settings() (HSTB.kluster.modules.backscatter.Allscatter class method) (HSTB.kluster.modules.backscatter.BScatter class method) (HSTB.kluster.modules.backscatter.Kmallscatter class method) (HSTB.kluster.modules.backscatter.S7kscatter class method) return_sorted_line_list() (HSTB.kluster.fqpr_project.FqprProject method) return_soundings_in_polygon() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.fqpr_project.FqprProject method) (HSTB.kluster.modules.subset.FqprSubset method) return_supported_casts_from_list() (in module HSTB.kluster.modules.svcorrect) return_surface() (HSTB.kluster.fqpr_project.FqprProject method) return_surface_containers() (HSTB.kluster.fqpr_project.FqprProject method) return_surface_paths() (HSTB.kluster.fqpr_project.FqprProject method) return_svcorr_xyz() (in module HSTB.kluster.fqpr_convenience) return_system_time_indexed_array() (HSTB.kluster.xarray_conversion.BatchRead method) return_total_pings() (HSTB.kluster.fqpr_generation.Fqpr method) return_total_soundings() (HSTB.kluster.fqpr_generation.Fqpr method) return_tpu_parameters() (HSTB.kluster.xarray_conversion.BatchRead method) return_tx_xyzrph() (HSTB.kluster.xarray_conversion.BatchRead method) return_unique_mode() (HSTB.kluster.fqpr_generation.Fqpr method) return_utm_zone_number() (HSTB.kluster.xarray_conversion.BatchRead method) return_vessel_file() (HSTB.kluster.fqpr_project.FqprProject method) return_waterline() (HSTB.kluster.xarray_conversion.BatchRead method) return_xyz_prefixes_for_systems() (HSTB.kluster.xarray_conversion.BatchRead method) return_xyzrph_from_mbes() (in module HSTB.kluster.xarray_conversion) return_xyzrph_from_posmv() (in module HSTB.kluster.xarray_conversion) return_xyzrph_sorted_timestamps() (HSTB.kluster.xarray_conversion.BatchRead method) run() (HSTB.kluster.monitor.WatchBuffer method) run_auto_patch_test() (HSTB.kluster.fqpr_project.FqprProject method) run_filter() (HSTB.kluster.fqpr_generation.Fqpr method) run_ray_trace_v2() (in module HSTB.kluster.modules.svcorrect) run_sv_correct() (HSTB.kluster.modules.svcorrect.SoundSpeedProfile method) rx_beam_width_description (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute)

S

S7kscatter (class in HSTB.kluster.modules.backscatter) save() (HSTB.kluster.fqpr_vessel.VesselFile method) save_animation_mpeg() (in module HSTB.kluster.modules.visualizations) save_event() (HSTB.kluster.modules.visualizations.Player method) save_project() (HSTB.kluster.fqpr_project.FqprProject method) sbet_navigation (HSTB.kluster.fqpr_generation.Fqpr attribute) seconds_to_formatted_string() (in module HSTB.kluster.fqpr_helpers) set() (HSTB.kluster.fqpr_actions.FqprAction method) set_auto_processing_mode() (HSTB.kluster.fqpr_intelligence.FqprIntel method) set_designated_surface() (HSTB.kluster.fqpr_intelligence.FqprIntel method) set_filter_by_polygon() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) set_pos() (HSTB.kluster.modules.visualizations.Player method) set_settings() (HSTB.kluster.fqpr_intelligence.FqprIntel method) (HSTB.kluster.fqpr_project.FqprProject method) set_variable_by_filter() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) set_vertical_reference() (HSTB.kluster.fqpr_generation.Fqpr method) set_vyperdatum_vdatum_path() (in module HSTB.kluster.modules.georeference) setup() (HSTB.kluster.modules.visualizations.Player method) show_layer() (HSTB.kluster.gdal_helpers.VectorLayer method) simplify_soundvelocity_profile() (in module HSTB.kluster.xarray_conversion) slice_xarray_by_dim() (in module HSTB.kluster.xarray_helpers) slowdown() (HSTB.kluster.modules.visualizations.Player method) smooth_signal() (in module HSTB.kluster.modules.wobble) sonar_model (HSTB.kluster.fqpr_generation.Fqpr attribute) sort_and_drop_duplicates() (in module HSTB.kluster.xarray_conversion) sort_lines_patch_test_pairs() (HSTB.kluster.fqpr_project.FqprProject method) soundings_plot_2d() (HSTB.kluster.modules.visualizations.FqprVisualizations method) soundings_plot_3d() (HSTB.kluster.modules.visualizations.FqprVisualizations method)

SoundSpeedProfile (class in HSTB.kluster.modules.svcorrect) speedup() (HSTB.kluster.modules.visualizations.Player method) spherical_spreading (HSTB.kluster.modules.backscatter.BScatter attribute) split_array_by_number_of_workers() (in module HSTB.kluster.dask_helpers) split_by_timestamp() (in module HSTB.kluster.fqpr_vessel) spreading_description (HSTB.kluster.modules.backscatter.S7kscatter attribute) stack_nan_array() (in module HSTB.kluster.xarray_helpers) start() (HSTB.kluster.modules.visualizations.Player method) (HSTB.kluster.monitor.DirectoryMonitor method) start_folder_monitor() (HSTB.kluster.fqpr_intelligence.FqprIntel method) status (HSTB.kluster.fqpr_generation.Fqpr attribute) StdErrFilter (class in HSTB.kluster.logging_conf) StdOutFilter (class in HSTB.kluster.logging_conf) stop() (HSTB.kluster.modules.visualizations.Player method) (HSTB.kluster.monitor.DirectoryMonitor method) stop_folder_monitor() (HSTB.kluster.fqpr_intelligence.FqprIntel method) subset_by_lines() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) subset_by_time() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) subset_by_time_and_beam() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) subset_by_times() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) subset_variables() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) subset_variables_by_line() (HSTB.kluster.fqpr_generation.Fqpr method) (HSTB.kluster.modules.subset.FqprSubset method) sv_correct() (HSTB.kluster.fqpr_generation.Fqpr method) SvpModule (class in HSTB.kluster.fqpr_intelligence)

T

total_distance_meters (HSTB.kluster.fqpr_generation.Fqpr attribute) Tpu (class in HSTB.kluster.modules.tpu) transform_ellipse() (in module HSTB.kluster.modules.georeference) transform_vyperdatum() (in module HSTB.kluster.modules.georeference) transmission_loss (HSTB.kluster.modules.backscatter.BScatter attribute) trim_xyzrprh_to_times() (in module HSTB.kluster.fqpr_vessel) tvg (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute)

tvg_description (HSTB.kluster.modules.backscatter.Kmallscatter attribute) tx_beam_width_description (HSTB.kluster.modules.backscatter.Allscatter attribute) (HSTB.kluster.modules.backscatter.BScatter attribute) (HSTB.kluster.modules.backscatter.Kmallscatter attribute) (HSTB.kluster.modules.backscatter.S7kscatter attribute)

U

update() (HSTB.kluster.fqpr_vessel.VesselFile method) (HSTB.kluster.modules.visualizations.Player method) update_action() (HSTB.kluster.fqpr_actions.FqprActionContainer method) update_action_from_list() (HSTB.kluster.fqpr_actions.FqprActionContainer method) update_actions_client() (HSTB.kluster.fqpr_actions.FqprActionContainer method) (HSTB.kluster.fqpr_intelligence.FqprIntel method) update_from_project() (HSTB.kluster.fqpr_intelligence.FqprIntel method) update_intel_for_action_results() (HSTB.kluster.fqpr_intelligence.FqprIntel method) update_kwargs_for_multibeam() (in module HSTB.kluster.fqpr_actions)

update_kwargs_for_navigation() (in module HSTB.kluster.fqpr_actions) update_kwargs_for_processing() (in module HSTB.kluster.fqpr_actions) update_kwargs_for_surface() (in module HSTB.kluster.fqpr_actions) update_kwargs_for_svp() (in module HSTB.kluster.fqpr_actions) update_matches() (HSTB.kluster.fqpr_intelligence.FqprIntel method) update_surface() (HSTB.kluster.fqpr_project.FqprProject method) (in module HSTB.kluster.fqpr_convenience) update_unmatched() (HSTB.kluster.fqpr_actions.FqprActionContainer method) UTCs80ToDateTime() (in module HSTB.kluster.utc_helpers)

V

validate_kluster_input_datum() (in module HSTB.kluster.fqpr_generation) validation_against_xyz88() (in module HSTB.kluster.fqpr_convenience) VectorLayer (class in HSTB.kluster.gdal_helpers)

VesselFile (class in HSTB.kluster.fqpr_vessel) visualize_beam_pointing_vectors() (HSTB.kluster.modules.visualizations.FqprVisualizations method) visualize_entwine() (in module HSTB.kluster.pdal_entwine) visualize_orientation_vector() (HSTB.kluster.modules.visualizations.FqprVisualizations method)

W

WatchBuffer (class in HSTB.kluster.monitor) WobbleTest (class in HSTB.kluster.modules.wobble)

write_attribute_to_ping_records() (HSTB.kluster.fqpr_generation.Fqpr method) write_intermediate_futs_to_zarr() (HSTB.kluster.fqpr_generation.Fqpr method) write_to_layer() (HSTB.kluster.gdal_helpers.VectorLayer method)

X

xarr_to_netcdf() (in module HSTB.kluster.xarray_helpers)

xarr_to_zarr() (in module HSTB.kluster.xarray_helpers)